Stem-loop eca-mir-1911

Accession

MI0028341

Description

Equus caballus eca-mir-1911 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

ucugccacugggcauccaucaucauucgcugggcauuugcugaguaccgccaugucuguugggcauccacagucuccCACCAGCCAUUGUGGUCUCUGCuggugcucugccauuucaccaccagugccuuccaugagaa
(((......((((((............((.(((((((.((.(((.(((((.(((.(((.((((...(....)...)))).))).))).)))))))).)).))))))).)).............))))))......))).

Structure

-   gccacu      -ccaucaucauuc  u       u  u   u     c   u   u    cau c 
 ucu      gggcau             gc gggcauu gc gag accgc aug cug uggg   c a
 |||      ||||||             || ||||||| || ||| ||||| ||| ||| ||||   |  
 aga      uccgug             cg cucgugg CG CUC UGGUG UAC GAC ACcc   g c
a   guaccu      accaccacuuuac  u       u  U   -     U   C   C    ucu a 

Annotation confidence Not enough data

Genome context

chrX: 90827278-90827416 [+]

Mature eca-miR-1911

• Accession: MIMAT0034704
• Description: Equus caballus eca-miR-1911 mature miRNA
• Sequence: 78 - CACCAGCCAUUGUGGUCUCUGC - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545