Stem-loop eca-mir-8908g-2

Accession

MI0028346

Description

Equus caballus eca-mir-8908g-2 precursor miRNA

Sequence

497 reads, 75 reads per million, 1 experiments

ggcagauucucuacuuugagccauucugugugcagugcccUACCCAGUAAGGUACUGAUCACUUacuuagacuacaugugaucagugccugucuggguggaguaaugcucuacaagaacaacguuugggagggucuucagacu
((.(((((((((....(((((..(((((((.(((.(((.((((((((..(((((((((((((...............)))))))))))))..)))))))).))).)))..))).))))....)))))))))))))))).....

Structure

-----  c         acuu     --ca    -   -u   g   c        UA             UUacuu 
     gg agauucucu    ugagc    uucu gug  gca ugc cUACCCAG  AGGUACUGAUCAC      a
     || |||||||||    |||||    |||| |||  ||| ||| ||||||||  |||||||||||||      g
     cu ucugggagg    guuug    aaga cau  cgu aug gguggguc  uccgugacuagug      a
ucaga  -         ----     caac    a   cu   a   a        ug             uacauc 

Annotation confidence Not enough data

Genome context

chrX: 115861091-115861233 [-]

Clustered miRNAs

19 other miRNAs are < 10 kb from eca-mir-8908g-2

Mature eca-miR-8908g

• Accession: MIMAT0034708
• Description: Equus caballus eca-miR-8908g mature miRNA
• Sequence: 41 - UACCCAGUAAGGUACUGAUCACUU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545