Stem-loop eca-mir-8908h

Accession

MI0028348

Description

Equus caballus eca-mir-8908h precursor miRNA

Sequence

398 reads, 60 reads per million, 1 experiments

ggcagauucuccacuuugauccauucugugugcagugcccUAUCCAGUAAGGUACUGAUCACUUAgacuauaugggaucagugccugucuggguggaguaaugcuugacaggaacaacauuugggagggucuucagacuggugcu
((.(((((((((....((.....((((((..(((.(((.((((((((..(((((((((((.((..........)))))))))))))..)))))))).))).)))...))))))....))....)))))))))))...........

Structure

-----------  c         acuu  aucca      -gu   g   c        UA           A  UAga 
           gg agauucucc    ug     uucugu   gca ugc cUAUCCAG  AGGUACUGAUC CU    c
           || |||||||||    ||     ||||||   ||| ||| ||||||||  ||||||||||| ||     
           cu ucugggagg    ac     aggaca   cgu aug gguggguc  uccgugacuag gg    u
ucguggucaga  -         guuu  -aaca      guu   a   a        ug           -  uaua 

Annotation confidence Not enough data

Genome context

chrX: 115879532-115879676 [-]

Clustered miRNAs

9 other miRNAs are < 10 kb from eca-mir-8908h

Mature eca-miR-8908h

• Accession: MIMAT0034710
• Description: Equus caballus eca-miR-8908h mature miRNA
• Sequence: 41 - UAUCCAGUAAGGUACUGAUCACUUA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545