Stem-loop eca-mir-8908g-1

Accession

MI0028353

Description

Equus caballus eca-mir-8908g-1 precursor miRNA

Sequence

48946 reads, 169.0 reads per million, 126 experiments

ugcagugcccUACCCAGUAAGGUACUGAUCACUUacuuagacuacaugugAUCAGUGCCUGUCUGGGUGGAguaaugcucuaa
.(((.(((.((((((((..(((((((((((((...............)))))))))))))..)))))))).))).))).....

Structure

----u   g   c        UA             UUacuu 
     gca ugc cUACCCAG  AGGUACUGAUCAC      a
     ||| ||| ||||||||  |||||||||||||      g
     cgu aug GGUGGGUC  UCCGUGACUAgug      a
aaucu   a   A        UG             uacauc 

Annotation confidence Medium

Genome context

X: 119910121-119910202 [-]

Clustered miRNAs

28 other miRNAs are < 10 kb from eca-mir-8908g-1

Mature eca-miR-8908g-5p

• Accession: MIMAT0034708
• Description: Equus caballus eca-miR-8908g-5p mature miRNA
• Sequence: 11 - UACCCAGUAAGGUACUGAUCACUU - 34
• Evidence: experimental ; Illumina [1]

Mature eca-miR-8908g-3p

• Accession: MIMAT0051571
• Description: Equus caballus eca-miR-8908g-3p mature miRNA
• Sequence: 51 - AUCAGUGCCUGUCUGGGUGGA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545