Stem-loop eca-mir-514a

Accession

MI0028357

Description

Equus caballus eca-mir-514a precursor miRNA

Sequence

16402 reads, 219.0 reads per million, 76 experiments

gcugugugcauuaccUCACUCCGGAAAGUGUCAAUCAUGUauaacuaaauaugaUUGACACCUCUGUGAGUGGAGUaacgccagcuauaugcaac
((((.(((..((((.((((((((((..(((((((((((((........))))))))))))).)))).)))))).)))))))))))..........

Structure

----------    u   ca    c      -    AA             aua 
          gcug gug  uuac UCACUC CGGA  GUGUCAAUCAUGU   a
          |||| |||  |||| |||||| ||||  |||||||||||||    
          cgac cgc  aaUG GGUGAG GUCU  CACAGUUaguaua   c
caacguauau    -   --    A      U    -C             aau 

Annotation confidence High

Genome context

X: 120848435-120848529 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from eca-mir-514a

Mature eca-miR-514a-5p

• Accession: MIMAT0034715
• Description: Equus caballus eca-miR-514a-5p mature miRNA
• Sequence: 16 - UCACUCCGGAAAGUGUCAAUCAUGU - 40
• Evidence: experimental ; Illumina [1]

Mature eca-miR-514a-3p

• Accession: MIMAT0051577
• Description: Equus caballus eca-miR-514a-3p mature miRNA
• Sequence: 55 - UUGACACCUCUGUGAGUGGAGU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545