Stem-loop eca-mir-9143

Accession

MI0028358

Description

Equus caballus eca-mir-9143 precursor miRNA

Sequence

23 reads, 3 reads per million, 1 experiments

acuauuuccucuuugguugguacauuugacccugaagacaaaucugugaugcagauguaaucauauucUCUGCACCGUAGGUUUGUUGUCAggguuaaaugggcuacuuuacauggaaaca
....(((((.....(((.(((.(((((((((((((.((((((((((((.((((((.(((....)))..)))))).)))))))))))).))))))))))))).))))))......)))))..

Structure

acua     -ucuuu   u   a             a            a      -u   a 
    uuucc      ggu ggu cauuugacccuga gacaaaucugug ugcaga  gua u
    |||||      ||| ||| ||||||||||||| |||||||||||| ||||||  |||  
    aaagg      uca ucg guaaauugggACU UUGUUUGGAUGC ACGUCU  uau c
--ac     uacauu   -   g             G            C      cu   a 

Annotation confidence Not enough data

Genome context

chrX: 115803288-115803408 [-]

Mature eca-miR-9143

• Accession: MIMAT0034716
• Description: Equus caballus eca-miR-9143 mature miRNA
• Sequence: 69 - UCUGCACCGUAGGUUUGUUGUCA - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545