Stem-loop eca-mir-8908i

Accession

MI0028365

Description

Equus caballus eca-mir-8908i precursor miRNA

Sequence

340 reads, 51 reads per million, 1 experiments

ggcagauccuccacuuugagccauucugugugcagugcccUACCCGGUAAGGUAGUGAUCACUUAgaugaggugugaucacugccugucuggguggaguaacgcacaacaggaacaauguuugggagggucuucagacuggugcu
((.(((((((((.(.........((((((((((..(((.((((((((..(((((((((((((...........)))))))))))))..)))))))).)))..)))).)))))).........))))))))))))...........

Structure

-----------  c         a uuugagcca      -    ag   c        UA             UUAg 
           gg agauccucc c         uucugu gugc  ugc cUACCCGG  AGGUAGUGAUCAC    a
           || ||||||||| |         |||||| ||||  ||| ||||||||  |||||||||||||    u
           cu ucugggagg g         aggaca cacg  aug gguggguc  uccgucacuagug    g
ucguggucaga  -         - uuuguaaca      a    ca   a        ug             ugga 

Annotation confidence Not enough data

Genome context

chrX: 115876504-115876648 [-]

Clustered miRNAs

12 other miRNAs are < 10 kb from eca-mir-8908i

Mature eca-miR-8908i

• Accession: MIMAT0034719
• Description: Equus caballus eca-miR-8908i mature miRNA
• Sequence: 41 - UACCCGGUAAGGUAGUGAUCACUUA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545