Stem-loop eca-mir-9145

Accession

MI0028367

Description

Equus caballus eca-mir-9145 precursor miRNA

Sequence

16 reads, 1.0 reads per million, 13 experiments

ccccaagugaagaaaagcagcaucaguaucgccugggagcuuguuagaacucgggcccuacccaugaccuuuugaaUUAGCGUUUGAGUUCUGACAAgauccgcaaugauaagugugcucauuaaaguuugggaggu
.((((((........((((.(((...(((((....(((.(((((((((((((((((.(((..((........))...))).))))))))))))))))).)))....))))).)))))))........))))))....

Structure

---c      ugaagaaa    g   cag     ccug   g                 c   -cc  uga 
    cccaag        agca cau   uaucg    gga cuuguuagaacucgggc cua   ca   c
    ||||||        |||| |||   |||||    ||| ||||||||||||||||| |||   ||    
    ggguuu        ucgu gug   auagu    ccu gAACAGUCUUGAGUUUG GAU   gu   c
ugga      gaaauuac    -   --a     aacg   a                 C   Uaa  uuu 

Annotation confidence Not enough data

Genome context

15: 18700143-18700279 [+]

Mature eca-miR-9145-3p

• Accession: MIMAT0034721
• Description: Equus caballus eca-miR-9145-3p mature miRNA
• Sequence: 77 - UUAGCGUUUGAGUUCUGACAA - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545