Stem-loop eca-mir-9160

Accession

MI0028384

Description

Equus caballus eca-mir-9160 precursor miRNA

Sequence

135 reads, 2.0 reads per million, 43 experiments

uuuguucucuccauucccucuuugaccaaggucauacauaaGCACGAUAACAGGCUCUUGGAAaacuagaucaguuuUCCAAGAGCCUGUUAUCGUGCUuauguacuaacaccauccuagacccuauggucaauagaaa
..................((((((((((.((((.(((((((((((((((((((((((((((((((((.....)))))))))))))))))))))))))))))))))..............))))...))))))).)))..

Structure

uuuguucucuccauuccc   -       --a    -------------a                                 a 
                  ucu uugacca   gguc              uacauaaGCACGAUAACAGGCUCUUGGAAaacu g
                  ||| |||||||   ||||              ||||||||||||||||||||||||||||||||| a
                  aga aacuggu   ccag              auguauUCGUGCUAUUGUCCGAGAACCUuuuga u
----------------aa   u       auc    auccuaccacaauc                                 c 

Annotation confidence Medium

Genome context

14: 47264531-47264669 [-]

Mature eca-miR-9160-5p

• Accession: MIMAT0051584
• Description: Equus caballus eca-miR-9160-5p mature miRNA
• Sequence: 42 - GCACGAUAACAGGCUCUUGGAA - 63
• Evidence: experimental ; Illumina [1]

Mature eca-miR-9160-3p

• Accession: MIMAT0034737
• Description: Equus caballus eca-miR-9160-3p mature miRNA
• Sequence: 78 - UCCAAGAGCCUGUUAUCGUGCU - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545