Stem-loop eca-mir-9161

Accession

MI0028385

Description

Equus caballus eca-mir-9161 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

cgguuggggugggcgaggacuugacuuuuccaggccaccucaggccccgucuucagccgcccggcagACGGGCCUCUAGGUCGCCUGGCcugcguuccccggggccggggcugcucaug
(((((.(((.((((((((...........((((((.((((.((((((.((((...(((....)))))))))))))..)))).))))))))).))))))))..)))))............

Structure

------------     -g   u     -   acuugacuuuu      c    -c      c    uca   g 
            cgguu  ggg gggcg agg           ccaggc accu  aggccc gucu   gcc c
            |||||  ||| ||||| |||           |||||| ||||  |||||| ||||   |||  
            gccgg  ccc cuugc ucC           GGUCCG UGGA  UCCGGG CAga   cgg c
guacucgucggg     gg   -     g   -----------      C    UC      -    ---   c 

Annotation confidence Not enough data

Genome context

chr14: 10824456-10824574 [-]

Mature eca-miR-9161

• Accession: MIMAT0034738
• Description: Equus caballus eca-miR-9161 mature miRNA
• Sequence: 68 - ACGGGCCUCUAGGUCGCCUGGC - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545