Stem-loop eca-mir-3613

Accession

MI0028389

Description

Equus caballus eca-mir-3613 precursor miRNA

Sequence

47 reads, 7 reads per million, 1 experiments

ccggcgcgcaacacgaugguuggguuuggauuguuguacuuuuuuuuuuguucguugcauuuuuaggaACAAAAAAAAAAGCCCAACCCUUcacaccacuucauccgcaucucugaggacc
..((.(((......(((((...(((.((((..((((..(((((((((((((((.(.........).)))))))))))))))..))))..)))).)))...)))))))).))..........

Structure

--------cc  c   caacac     uug   u    uu    ua               g ugc 
          gg gcg      gaugg   ggu ugga  guug  cuuuuuuuuuuguuc u   a
          || |||      |||||   ||| ||||  ||||  ||||||||||||||| |   u
          cu cgc      cuacu   cca acUU  CAAC  GAAAAAAAAAACAag a   u
ccaggagucu  a   ------     uca   c    CC    CC               g uuu 

Annotation confidence Not enough data

Genome context

chr17: 21184996-21185116 [+]

Mature eca-miR-3613

• Accession: MIMAT0034742
• Description: Equus caballus eca-miR-3613 mature miRNA
• Sequence: 69 - ACAAAAAAAAAAGCCCAACCCUU - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545