Stem-loop eca-mir-9169

Accession

MI0028395

Description

Equus caballus eca-mir-9169 precursor miRNA

Sequence

66 reads, 4.0 reads per million, 33 experiments

caucucagugcugagggucuucacggugauggagcugagugagcugaggggcuGCACGGUGAUGGAGCUGAGUGCCugucagcccugaggg
..((((((.(((((((((.((((..((..((..((((.((.((((....)))))).))))..))..)))))).)))).))))).)))))).

Structure

ca      u     -    c    cg  ga  ga    a  g    g 
  ucucag gcuga gggu uuca  gu  ug  gcug gu agcu a
  |||||| ||||| |||| ||||  ||  ||  |||| || ||||  
  ggaguc cgacu uCCG GAGU  CG  GU  UGGC CG ucgg g
-g      c     g    U    --  AG  AG    A  -    g 

Annotation confidence Not enough data

Genome context

16: 2349634-2349724 [+]

Mature eca-miR-9169-3p

• Accession: MIMAT0034747
• Description: Equus caballus eca-miR-9169-3p mature miRNA
• Sequence: 54 - GCACGGUGAUGGAGCUGAGUGCC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545