Stem-loop eca-mir-9177

Accession

MI0028405

Description

Equus caballus eca-mir-9177 precursor miRNA

Sequence

6 reads, 1 reads per million, 1 experiments

augcagaaaccguuacuuacaggaacaccauccugcuuugcucccacuuuguccuguggccugauuaccagGAGCAGUGGGUGCAGACAGGCuggcacucuugggaucagcuuucugcugaagcuac
..(((((((..(((.....(((((...(((.((((.(((((.((((((...(((((.(.........))))))..)))))).))))))))).)))...))))).....)))))))))).........

Structure

-------au       cc   acuua     aca   u    c     u      uug     u gcc 
         gcagaaa  guu     cagga   cca ccug uuugc cccacu   uccug g   u
         |||||||  |||     |||||   ||| |||| ||||| ||||||   ||||| |   g
         cgucuuu  cga     guucu   ggu GGAC AGACG GGGUGA   AGgac c   a
caucgaagu       --   cuagg     cac   C    -     U      -CG     - auu 

Annotation confidence Not enough data

Genome context

chr19: 35753045-35753171 [+]

Mature eca-miR-9177

• Accession: MIMAT0034757
• Description: Equus caballus eca-miR-9177 mature miRNA
• Sequence: 72 - GAGCAGUGGGUGCAGACAGGC - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545