Stem-loop eca-mir-6529

Accession

MI0028409

Description

Equus caballus eca-mir-6529 precursor miRNA

Sequence

142299 reads, 321.0 reads per million, 188 experiments

aaccuguucucuuGAGAGAUCAGAGGCGCAGAGUgcgucaaugucagugaagCCUGUGCCUUUUACCUCUUUAAgagcgcacgguuuca
(((((((.((((((((((...((((((((((...((.(((.......))).))))))))))))...))).))))))).))).))))...

Structure

---    -   u       -   AUC          AGU  g   au 
   aacc ugu cucuuGA GAG   AGAGGCGCAG   gc uca  g
   |||| ||| ||||||| |||   ||||||||||   || |||  u
   uugg acg gagAAUU CUC   UUUCCGUGUC   Cg agu  c
acu    c   c       U   CAU          ---  a   ga 

Annotation confidence High

Genome context

19: 41398414-41398502 [+]

Mature eca-miR-6529-5p

• Accession: MIMAT0051591
• Description: Equus caballus eca-miR-6529-5p mature miRNA
• Sequence: 14 - GAGAGAUCAGAGGCGCAGAGU - 34
• Evidence: experimental ; Illumina [1]

Mature eca-miR-6529-3p

• Accession: MIMAT0034760
• Description: Equus caballus eca-miR-6529-3p mature miRNA
• Sequence: 53 - CCUGUGCCUUUUACCUCUUUAA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545