Stem-loop eca-mir-9182

Accession

MI0028412

Description

Equus caballus eca-mir-9182 precursor miRNA

Sequence

1240 reads, 7.0 reads per million, 106 experiments

acugauggugcuacuuugaacugcuuuucuuuucuccuuuUUGCACAAAGAGUCUCAUGUCUgauauuuagACAUGAUGAGCUUUGUGCAAaaggggaccugguuacugcuugcucugcuucaucccacucuuauucug
...(((((.((......(....((....((....((((((((((((((((..((((((((((((...)))))))))).)).))))))))))))))))....)).....))...)...)).)))))..............

Structure

-----------acu     u  uacuuu aacu  -uuuu  uuuc                AG  -          u 
              gaugg gc      g    gc     cu    uccuuuUUGCACAAAG  UC UCAUGUCUga  
              ||||| ||      |    ||     ||    ||||||||||||||||  || |||||||||| a
              cuacu cg      c    cg     gg    ggggaaAACGUGUUUC  AG AGUACAgauu  
gucuuauucucacc     u  ---ucu -guu  ucauu  ucca                -G  U          u 

Annotation confidence Medium

Genome context

18: 65602109-65602247 [+]

Mature eca-miR-9182-5p

• Accession: MIMAT0034763
• Description: Equus caballus eca-miR-9182-5p mature miRNA
• Sequence: 41 - UUGCACAAAGAGUCUCAUGUCU - 62
• Evidence: experimental ; Illumina [1]

Mature eca-miR-9182-3p

• Accession: MIMAT0051592
• Description: Equus caballus eca-miR-9182-3p mature miRNA
• Sequence: 72 - ACAUGAUGAGCUUUGUGCAA - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545