Stem-loop eca-mir-9183

Accession

MI0028413

Description

Equus caballus eca-mir-9183 precursor miRNA

Sequence

2 reads, 0 reads per million, 1 experiments

cgccgggccugucguaaacucauuaccuccagacgucucgCCGGCUCGAUGGCUUUAUGACAacuuggcucguuccuguuuucaaaggccccuagguaucggguuggcugcaggggcggggguacgcagcaccuucugc
....((..(((.(((.........((((((.(.(.(((((((((((((((((((((.(((.(((..((......)).))).))))))))).......))))))))))).).))).))))))))))))))..))......

Structure

--cgcc  gc   u   aaacucauu      a a g   - -           -------      A   C   uu  cu 
      gg  cug cgu         accucc g c ucu c gCCGGCUCGAU       GGCUUU UGA Aac  gg  c
      ||  ||| |||         |||||| | | ||| | |||||||||||       |||||| ||| |||  ||   
      cc  gac gca         uggggg c g gga g cgguugggcua       ccggaa acu uug  cc  g
cgucuu  ac   -   ---------      - - g   c u           uggaucc      -   u   -u  uu 

Annotation confidence Not enough data

Genome context

chr18: 54585543-54585681 [-]

Mature eca-miR-9183

• Accession: MIMAT0034764
• Description: Equus caballus eca-miR-9183 mature miRNA
• Sequence: 41 - CCGGCUCGAUGGCUUUAUGACA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545