Stem-loop eca-mir-9184

Accession

MI0028414

Description

Equus caballus eca-mir-9184 precursor miRNA

Sequence

405 reads, 18.0 reads per million, 88 experiments

uguaUGUGGGAUGCUGCCACAGcauggcuugaugcgcggucuguagguccauagccaggcccagcacccgcagucccagggcCACUGAAGUGGAGUGCAUGAACUcagc
......((((((((..((((..((((((((((((((.((((((..((((........))))))).))))))).))...)))))).))..))))...))))...))))..

Structure

uguaUG    ---    -UG    AG  -      ---  -    c   -   ua    cau 
      UGGG   AUGC   CCAC  ca uggcuu   ga ugcg ggu cug  gguc   a
      ||||   ||||   ||||  || ||||||   || |||| ||| |||  ||||    
      acUC   UACG   GGUG  GU ACcggg   cu acgc cca gac  ccgg   g
----cg    AAG    UGA    AA  C      acc  g    -   c   --    acc 

Annotation confidence Low

Genome context

18: 826623-826731 [-]

Mature eca-miR-9184-5p

• Accession: MIMAT0034765
• Description: Equus caballus eca-miR-9184-5p mature miRNA
• Sequence: 5 - UGUGGGAUGCUGCCACAG - 22
• Evidence: experimental ; Illumina [1]

Mature eca-miR-9184-3p

• Accession: MIMAT0051593
• Description: Equus caballus eca-miR-9184-3p mature miRNA
• Sequence: 83 - CACUGAAGUGGAGUGCAUGAACU - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545