Stem-loop efu-mir-9198b-2

Accession

MI0028436

Description

Eptesicus fuscus efu-mir-9198b-2 precursor miRNA

Sequence

197 reads, 3.0 reads per million, 8 experiments

gccgcuGCUCGCACCUGCUGCUGGcgccuggugcuggucccgaucgCUUGGUGCUGUCAGUGGGUGCGAgcggcaguug
((.(((((((((((((((((.(((((((.((((.(.(...).).)))).))))))).))))))))))))))))).))..

Structure

--  c                 C       u    c g u 
  gc gcuGCUCGCACCUGCUG UGGcgcc ggug u g  
  || ||||||||||||||||| ||||||| |||| | | c
  ug cggcgAGCGUGGGUGAC GUCGUGG UCgc a c  
gu  a                 U       U    u g c 

Annotation confidence Medium

Genome context

JH977639.1: 13851730-13851808 [+]

Mature efu-miR-9198b-2-5p

• Accession: MIMAT0058706
• Description: Eptesicus fuscus efu-miR-9198b-2-5p mature miRNA
• Sequence: 7 - GCUCGCACCUGCUGCUGG - 24
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9198b-3p

• Accession: MIMAT0034780
• Description: Eptesicus fuscus efu-miR-9198b-3p mature miRNA
• Sequence: 47 - CUUGGUGCUGUCAGUGGGUGCGA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545