miRBase entry: efu-mir-9198d

Stem-loop efu-mir-9198d


Accession
MI0028440
Description
Eptesicus fuscus efu-mir-9198d precursor miRNA


Sequence

uggagucaccACUUGCACCCGCUGAUGGUGCcaagcgaucagggccagcgcuggcagugggugugagugccgggugggac
.....(((((((((((((((((((..(((((...((.......))..)))))..))))))))))))))....)))))...

Structure
uggag     ----              AU     caa  ga 
     ucacc    ACUUGCACCCGCUG  GGUGC   gc  u
     |||||    ||||||||||||||  |||||   ||  c
     ggugg    ugagugugggugac  ucgcg   cg  a
--cag     gccg              gg     -ac  gg 


Annotation confidence Not enough data
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Genome context
JH977616.1: 11262411-11262490 [-]

Database links

Mature efu-miR-9198d

Accession MIMAT0034782
Description Eptesicus fuscus efu-miR-9198d mature miRNA
Sequence 11 - ACUUGCACCCGCUGAUGGUGC - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545