Stem-loop efu-mir-9198b-5

Accession

MI0028441

Description

Eptesicus fuscus efu-mir-9198b-5 precursor miRNA

Sequence

173 reads, 3.0 reads per million, 8 experiments

gcugccgcucACACCCACUGCUGGCACCUGgcgccggaccugaucgCUUGGUGCUGUCAGUGGGUGCGAgcggcggcug
((((((((((.(((((((((.(((((((.((((.((....))..)))).))))))).))))))))).))))))))))..

Structure

--          A         C       U    -c  g 
  gcugccgcuc CACCCACUG UGGCACC Ggcg  cg a
  |||||||||| ||||||||| ||||||| ||||  ||  
  cggcggcgAG GUGGGUGAC GUCGUGG UCgc  gu c
gu          C         U       U    ua  c 

Annotation confidence Not enough data

Genome context

JH977612.1: 6395026-6395104 [+]

Mature efu-miR-9198b-5-5p

• Accession: MIMAT0058708
• Description: Eptesicus fuscus efu-miR-9198b-5-5p mature miRNA
• Sequence: 11 - ACACCCACUGCUGGCACCUG - 30
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9198b-3p

• Accession: MIMAT0034780
• Description: Eptesicus fuscus efu-miR-9198b-3p mature miRNA
• Sequence: 47 - CUUGGUGCUGUCAGUGGGUGCGA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545