Stem-loop efu-mir-9201a-2

Accession

MI0028445

Description

Eptesicus fuscus efu-mir-9201a-2 precursor miRNA

Sequence

115 reads, 2.0 reads per million, 8 experiments

aggccugcggagAGAGAGGCAGGGUCUGAUCcucagcuuccauggcagcuguugAUCAGCUGUUGCCUCUCUCUUUcucuccuggc
(((...(.((((((((((((((.(.((((((..(((((........)))))..)))))).).)))))))))))))))...)))...

Structure

---   ccu c              G U      cu     ucc 
   agg   g ggagAGAGAGGCAG G CUGAUC  cagcu   a
   |||   | |||||||||||||| | ||||||  |||||    
   ucc   c UUUCUCUCUCCGUU U GACUAg  gucga   u
cgg   ucu -              G C      uu     cgg 

Annotation confidence Medium

Genome context

JH977617.1: 30745806-30745891 [+]

Mature efu-miR-9201a-5p

• Accession: MIMAT0058709
• Description: Eptesicus fuscus efu-miR-9201a-5p mature miRNA
• Sequence: 13 - AGAGAGGCAGGGUCUGAUC - 31
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9201a-3p

• Accession: MIMAT0034785
• Description: Eptesicus fuscus efu-miR-9201a-3p mature miRNA
• Sequence: 55 - AUCAGCUGUUGCCUCUCUCUUU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545