Stem-loop efu-mir-9213

Accession

MI0028467

Description

Eptesicus fuscus efu-mir-9213 precursor miRNA

Sequence

330 reads, 14.0 reads per million, 7 experiments

uugugguggcUGGUACCAUGGAUCUGUCUCUCGCCcaguggggugagcugggcccucccUGGAGAAGAAACCUGGGUUacccaagau
(((.((((((((((.(((.(((...(((((((((((....)))))))..))))..))).))).......)))..))))))))))...

Structure

---   u       --   ------A   U   UCU    --       a 
   uug gguggcU  GGU       CCA GGA   GUCU  CUCGCCc g
   ||| |||||||  |||       ||| |||   ||||  |||||||  
   aac ccaUUGG  CCA       GGU ccu   cggg  gaguggg u
uag   -       GU   AAGAAGA   c   -cc    uc       g 

Annotation confidence Medium

Genome context

JH978305.1: 19309-19395 [+]

Mature efu-miR-9213-5p

• Accession: MIMAT0034804
• Description: Eptesicus fuscus efu-miR-9213-5p mature miRNA
• Sequence: 11 - UGGUACCAUGGAUCUGUCUCUCGCC - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9213-3p

• Accession: MIMAT0058715
• Description: Eptesicus fuscus efu-miR-9213-3p mature miRNA
• Sequence: 60 - UGGAGAAGAAACCUGGGUU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545