miRBase entry: efu-mir-9215a-3

Stem-loop efu-mir-9215a-3


Accession
MI0028473
Description
Eptesicus fuscus efu-mir-9215a-3 precursor miRNA


Sequence

ugaagugcucUGACACUAGGACGUGUGGCUGCCauagauuggugggaaccaggcuugcccagggucaguguucucagcauucagu
((((.((((..((((((.(..(.((.(((.(((......((((....)))))))..))))).)..))))).))..))))))))..

Structure
--    g    cU  -    A GA G  U   -U   auagau    g 
  ugaa ugcu  GA CACU G  C UG GGC  GCC      uggu g
  |||| ||||  || |||| |  | || |||  |||      ||||  
  acuu acga  cu guga c  g ac ccg  cgg      acca g
ug    -    cu  u    - ug g  -   uu   ------    a 


Annotation confidence Not enough data
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Genome context
JH977677.1: 1513225-1513309 [+]

Database links

Mature efu-miR-9215a

Accession MIMAT0034806
Description Eptesicus fuscus efu-miR-9215a mature miRNA
Sequence 11 - UGACACUAGGACGUGUGGCUGCC - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545