Stem-loop efu-mir-378

Accession

MI0028481

Description

Eptesicus fuscus efu-mir-378 precursor miRNA

Sequence

124292 reads, 1258.0 reads per million, 8 experiments

gccacccagggCUCCUGACUCCAGGUCCUGUGUguuaccucgaaauagCACUGGACUUGGAGUCAGAAGGCCugaguggagu
.((((.((((.((.((((((((((((((.((((..(........)..)))).)))))))))))))).)).)))).))))...

Structure

--g    c    g  C              U    gu acc 
   ccac cagg CU CUGACUCCAGGUCC GUGU  u   u
   |||| |||| || |||||||||||||| ||||  |    
   ggug guCC GA GACUGAGGUUCAGG CACg  a   c
uga    a    G  A              U    au aag 

Annotation confidence High

Genome context

JH977686.1: 1192181-1192262 [+]

Mature efu-miR-378-5p

• Accession: MIMAT0058718
• Description: Eptesicus fuscus efu-miR-378-5p mature miRNA
• Sequence: 12 - CUCCUGACUCCAGGUCCUGUGU - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-378-3p

• Accession: MIMAT0034813
• Description: Eptesicus fuscus efu-miR-378-3p mature miRNA
• Sequence: 49 - CACUGGACUUGGAGUCAGAAGGCC - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545