Stem-loop efu-mir-9237c

Accession

MI0028512

Description

Eptesicus fuscus efu-mir-9237c precursor miRNA

Sequence

979 reads, 42.0 reads per million, 8 experiments

uuguuguuggUAUCAGUGGGAGAAGUUGACCUCuaggccaauuggcugUGAGGAUCAGCUGUGUCUACuccgggagacagccuuaugagaca
..((((((......((((((...((((((((((..((((....))))..)))).))))))...))))))......))))))...........

Structure

---------uu      ggUAUC      AGA      -    ua    a 
           guuguu      AGUGGG   AGUUGA CCUC  ggcc a
           ||||||      ||||||   |||||| ||||  ||||  
           cgacag      uCAUCU   UCGACU GGAG  ucgg u
acagaguauuc      agggcc      GUG      A    Ug    u 

Annotation confidence Medium

Genome context

JH977811.1: 754561-754652 [-]

Mature efu-miR-9237c-5p

• Accession: MIMAT0034840
• Description: Eptesicus fuscus efu-miR-9237c-5p mature miRNA
• Sequence: 11 - UAUCAGUGGGAGAAGUUGACCUC - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9237c-3p

• Accession: MIMAT0058729
• Description: Eptesicus fuscus efu-miR-9237c-3p mature miRNA
• Sequence: 49 - UGAGGAUCAGCUGUGUCUAC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545