Stem-loop efu-mir-9243a

Accession

MI0028533

Description

Eptesicus fuscus efu-mir-9243a precursor miRNA

Sequence

1867 reads, 21.0 reads per million, 8 experiments

ccuugcacgaAUUCCAUGCAUUAGGCCUCUAGUguaguuauaacaauacuAGAGGCCCAGUGCACGAAUccgugcaugggu
((.((((((.((((..((((((.((((((((((((.((....)).)))))))))))).)))))).)))).)))))).))..

Structure

--  u      a    CA      A            a  u 
  cc ugcacg AUUC  UGCAUU GGCCUCUAGUgu gu a
  || |||||| ||||  |||||| |||||||||||| ||  
  gg acgugc UAAG  ACGUGA CCGGAGAucaua ca u
ug  u      c    -C      C            a  a 

Annotation confidence Medium

Genome context

JH977664.1: 5440429-5440509 [+]

Mature efu-miR-9243a-5p

• Accession: MIMAT0034858
• Description: Eptesicus fuscus efu-miR-9243a-5p mature miRNA
• Sequence: 11 - AUUCCAUGCAUUAGGCCUCUAGU - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9243a-3p

• Accession: MIMAT0058735
• Description: Eptesicus fuscus efu-miR-9243a-3p mature miRNA
• Sequence: 51 - AGAGGCCCAGUGCACGAAU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545