Stem-loop efu-mir-9249

Accession

MI0028541

Description

Eptesicus fuscus efu-mir-9249 precursor miRNA

Sequence

60 reads, 3.0 reads per million, 5 experiments

ccagGUUGACCAGCCUUCCGGGUuccuuguccacaccucccugcuggUGAGGACAAUGGGCGGCUUCCaacagcuuuu
..((((((...((((.((((......((((((.((((........)))).)))))))))).)))).....))))))..

Structure

cc      --ACC    U    GGUucc      a    ucc 
  agGUUG     AGCC UCCG      uugucc cacc   c
  ||||||     |||| ||||      |||||| ||||    
  uucgac     UCGG GGGU      AACAGG GUgg   u
uu      aaCCU    C    ------      A    ucg 

Annotation confidence Not enough data

Genome context

JH977614.1: 36412317-36412394 [+]

Mature efu-miR-9249-5p

• Accession: MIMAT0058736
• Description: Eptesicus fuscus efu-miR-9249-5p mature miRNA
• Sequence: 5 - GUUGACCAGCCUUCCGGGU - 23
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9249-3p

• Accession: MIMAT0034866
• Description: Eptesicus fuscus efu-miR-9249-3p mature miRNA
• Sequence: 48 - UGAGGACAAUGGGCGGCUUCC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545