Stem-loop efu-mir-9269

Accession

MI0028585

Description

Eptesicus fuscus efu-mir-9269 precursor miRNA

Sequence

6728 reads, 846.0 reads per million, 2 experiments

agaacugUGUGUGGUCUAUGACAGGUGAGGUCgcccaggcaggcgUGCAGACACCUGACAUUGGCCGCGCgggcugugug
.....(.(((((((((.(((.((((((..((((((......)))).))...)))))).))).))))))))).).......

Structure

--agaac g         U   A      -AG  -    ca 
       u UGUGUGGUC AUG CAGGUG   GU Cgcc  g
       | ||||||||| ||| ||||||   || ||||   
       g gCGCGCCGG UAC GUCCAC   CG gcgg  g
guguguc g         U   A      AGA  U    ac 

Annotation confidence Medium

Genome context

JH977749.1: 1676271-1676350 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-9269

Mature efu-miR-9269-5p

• Accession: MIMAT0058745
• Description: Eptesicus fuscus efu-miR-9269-5p mature miRNA
• Sequence: 8 - UGUGUGGUCUAUGACAGGUGAGGUC - 32
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9269-3p

• Accession: MIMAT0034901
• Description: Eptesicus fuscus efu-miR-9269-3p mature miRNA
• Sequence: 46 - UGCAGACACCUGACAUUGGCCGCGC - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545