Stem-loop efu-mir-101

Accession

MI0028598

Description

Eptesicus fuscus efu-mir-101 precursor miRNA

Literature search

1 open access papers mention efu-mir-101
(1 sentences)

Sequence

43835 reads, 1610.0 reads per million, 8 experiments

ggcugcccuggcUCAGUUAUCACAGUGCUGAUGcuguccauucuaaagGUACAGUACUGUGAUAACUGAAGGAuggcagccaa
(((((((.....((((((((((((((((((.((((............)))))))))))))))))))))).....)))))))..

Structure

--       cuggc                  A    gucca 
  ggcugcc     UCAGUUAUCACAGUGCUG UGcu     u
  |||||||     |||||||||||||||||| ||||      
  ccgacgg     AGUCAAUAGUGUCAUGAC AUGg     u
aa       uAGGA                  -    aaauc 

Annotation confidence High

Genome context

JH977620.1: 15004278-15004360 [-]

Mature efu-miR-101-5p

• Accession: MIMAT0058753
• Description: Eptesicus fuscus efu-miR-101-5p mature miRNA
• Sequence: 13 - UCAGUUAUCACAGUGCUGAUG - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-101-3p

• Accession: MIMAT0034913
• Description: Eptesicus fuscus efu-miR-101-3p mature miRNA
• Sequence: 49 - GUACAGUACUGUGAUAACUGAAGGA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545