Stem-loop efu-mir-125b

Accession

MI0028604

Description

Eptesicus fuscus efu-mir-125b precursor miRNA

Sequence

271554 reads, 4048.0 reads per million, 8 experiments

cuuuuccuagUCCCUGAGACCCUAACUUGUGAGGuauuucaguaacaucACAAGUCAGGCUCUUGGGACCUaggcggagag
((((.(((((((((.((((.(((.((((((((.((.........)).)))))))).))).)))))))).))))).))))..

Structure

--    u     -    U    C   A        G  auu 
  cuuu ccuag UCCC GAGA CCU ACUUGUGA Gu   u
  |||| ||||| |||| |||| ||| |||||||| ||   c
  gagg ggaUC AGGG UUCU GGA UGAACAcu ca   a
ga    c     C    -    C   C        a  aug 

Annotation confidence High

Genome context

JH977643.1: 566438-566518 [+]

Mature efu-miR-125b-5p

• Accession: MIMAT0034919
• Description: Eptesicus fuscus efu-miR-125b-5p mature miRNA
• Sequence: 11 - UCCCUGAGACCCUAACUUGUGAGG - 34
• Evidence: experimental ; Illumina [1]

Mature efu-miR-125b-3p

• Accession: MIMAT0058758
• Description: Eptesicus fuscus efu-miR-125b-3p mature miRNA
• Sequence: 50 - ACAAGUCAGGCUCUUGGGACCU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545