Stem-loop efu-mir-10

Accession

MI0028605

Description

Eptesicus fuscus efu-mir-10 precursor miRNA

Sequence

22194951 reads, 186758.0 reads per million, 8 experiments

gucuauauaUACCCUGUAGAACCGAAUUUGUgugguauccacauagucACAGAUUCGAUUCUAGGGGAAUauauggucga
(.((((((((.((((.(((((.((((((((((.(.(((....))).))))))))))).))))))))).)))))))).)..

Structure

-- u        A    G     C          u g   c 
  g cuauauaU CCCU UAGAA CGAAUUUGUg g uau c
  | |||||||| |||| ||||| |||||||||| | |||  
  c gguauaUA GGGG AUCUU GCUUAGACAc u aua a
ag u        A    -     A          - g   c 

Annotation confidence Medium

Genome context

JH977618.1: 11647060-11647139 [-]

Mature efu-miR-10-5p

• Accession: MIMAT0058759
• Description: Eptesicus fuscus efu-miR-10-5p mature miRNA
• Sequence: 10 - UACCCUGUAGAACCGAAUUUGU - 31
• Evidence: experimental ; Illumina [1]

Mature efu-miR-10-3p

• Accession: MIMAT0034920
• Description: Eptesicus fuscus efu-miR-10-3p mature miRNA
• Sequence: 49 - ACAGAUUCGAUUCUAGGGGAAU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545