Stem-loop efu-mir-136

Accession

MI0028618

Description

Eptesicus fuscus efu-mir-136 precursor miRNA

Sequence

2073 reads, 46.0 reads per million, 8 experiments

cccucagaggACUCCAUUUGUUUUGAUGAUGGauucuuacgcucCAUCAUCGUCUCAAAUGAGUCUucagaggguu
(((((.((((((((.(((((...((((((((((.........))))))))))...))))))))))))).)))))..

Structure

--     a        C     UUU          uuc 
  cccuc gaggACUC AUUUG   UGAUGAUGGa   u
  ||||| |||||||| |||||   ||||||||||   u
  gggag cuUCUGAG UAAAC   GCUACUACcu   a
uu     a        -     UCU          cgc 

Annotation confidence High

Genome context

JH977717.1: 985070-985145 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from efu-mir-136

Mature efu-miR-136-5p

• Accession: MIMAT0034932
• Description: Eptesicus fuscus efu-miR-136-5p mature miRNA
• Sequence: 11 - ACUCCAUUUGUUUUGAUGAUGG - 32
• Evidence: experimental ; Illumina [1]

Mature efu-miR-136-3p

• Accession: MIMAT0058765
• Description: Eptesicus fuscus efu-miR-136-3p mature miRNA
• Sequence: 45 - CAUCAUCGUCUCAAAUGAGUCU - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545