Stem-loop efu-mir-9283

Accession

MI0028620

Description

Eptesicus fuscus efu-mir-9283 precursor miRNA

Sequence

agacacggccUGUGGCCUUGAAGCUGAGCGGAGGGgagcccuccggggcccgcagccucgcgcucggcucugggcuggcugggccggcuuugc
.....((((((((.((((.((.((((((((((((((.((((....))))))....)))).)))))))))).))))..)).)))))).......

Structure

--agaca      -  -G    U  A        -    ----  a    u 
       cggccU GU  GCCU GA GCUGAGCG GAGG    Gg gccc c
       |||||| ||  |||| || |||||||| ||||    || ||||  
       gccggg cg  cggg cu cggcucgc cucc    cc cggg c
cguuucg      u  gu    u  -        g    gacg  -    g 

Annotation confidence Not enough data

Genome context

JH977683.1: 6854838-6854930 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from efu-mir-9283

Mature efu-miR-9283

• Accession: MIMAT0034934
• Description: Eptesicus fuscus efu-miR-9283 mature miRNA
• Sequence: 11 - UGUGGCCUUGAAGCUGAGCGGAGGG - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545