Stem-loop efu-mir-99a

Accession

MI0028629

Description

Eptesicus fuscus efu-mir-99a precursor miRNA

Sequence

863092 reads, 18311.0 reads per million, 8 experiments

ccauuggcauAAACCCGUAGAUCCGAUCUUGUGGUgaaguggaccgcaCAAGCUCGCUUCUAUGGGUCUGUgucagugugg
.((((((((((.(((((((((..(((.((((((.((........)))))))).)))..))))))))).))))))))))...

Structure

--c          A         UC   U      G  aag 
   cauuggcauA ACCCGUAGA  CGA CUUGUG Ug   u
   |||||||||| |||||||||  ||| |||||| ||    
   gugacugUGU UGGGUAUCU  GCU GAACac gc   g
ggu          C         UC   C      -  cag 

Annotation confidence High

Genome context

JH977643.1: 518687-518767 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-99a

Mature efu-miR-99a-5p

• Accession: MIMAT0034944
• Description: Eptesicus fuscus efu-miR-99a-5p mature miRNA
• Sequence: 11 - AAACCCGUAGAUCCGAUCUUGUGGU - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-99a-3p

• Accession: MIMAT0058770
• Description: Eptesicus fuscus efu-miR-99a-3p mature miRNA
• Sequence: 49 - CAAGCUCGCUUCUAUGGGUCUGU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545