Stem-loop efu-mir-9289

Accession

MI0028632

Description

Eptesicus fuscus efu-mir-9289 precursor miRNA

Sequence

aaugagacccaagaacccccagcgacuccuuggacacuuuucacugUGUUCUGUUAGGGGGCUUAAAGGuguguucugu
...((.((((...(((((((((((.......((((((........)))))))))).))))).))...)).)).))....

Structure

-aau  g  -  aag  -     -    acuccuu      uuu 
    ga ac cc   aa ccccc agcg       ggacac   u
    || || ||   || ||||| ||||       ||||||    
    uu ug GG   UU GGGGG UUGU       CUUGUg   c
uguc  g  u  AAA  C     A    -------      uca 

Annotation confidence Not enough data

Genome context

JH977709.1: 101978-102056 [+]

Mature efu-miR-9289

• Accession: MIMAT0034947
• Description: Eptesicus fuscus efu-miR-9289 mature miRNA
• Sequence: 47 - UGUUCUGUUAGGGGGCUUAAAGG - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545