Stem-loop efu-mir-9290

Accession

MI0028633

Description

Eptesicus fuscus efu-mir-9290 precursor miRNA

Sequence

2193 reads, 22.0 reads per million, 8 experiments

cgacuggaggAGGGGCCACACUCGGGUGACCUUggauauuuaguacgaaGGCUCCCCAGCGCUGCCUCUCUcccacucugg
.((.(((.((((((((..(.((.(((.((((((.(.(((...)))).)))).))))))).)..)))))))).))).))...

Structure

--c  c   a        CA A  C   U  -    g a   u 
   ga ugg ggAGGGGC  C CU GGG GA CCUU g uau  
   || ||| ||||||||  | || ||| || |||| | ||| u
   cu acc UCUCUCCG  G GA CCC CU GGaa c aug  
ggu  c   c        UC C  -   -  C    g -   a 

Annotation confidence High

Genome context

JH977811.1: 1416102-1416182 [-]

Mature efu-miR-9290-5p

• Accession: MIMAT0058773
• Description: Eptesicus fuscus efu-miR-9290-5p mature miRNA
• Sequence: 11 - AGGGGCCACACUCGGGUGACCUU - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9290-3p

• Accession: MIMAT0034948
• Description: Eptesicus fuscus efu-miR-9290-3p mature miRNA
• Sequence: 50 - GGCUCCCCAGCGCUGCCUCUCU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545