miRBase entry: efu-mir-9292

Stem-loop efu-mir-9292

Accession

MI0028637

Description

Eptesicus fuscus efu-mir-9292 precursor miRNA

Sequence

gcagggcuguAGCACCAGCCUCCAAAGUAGGUUCUggaaugauggggaguuccaguaccaacaguggaaagguuggcugcugagccugaacgg
...(((((.(((((((((((((((..((.(((.(((((((........))))))).))).))..))))..)))))).))))))))))......

Structure

---gca     g     -      --    AA  A   U       gau 
      gggcu uAGCA CCAGCC  UCCA  GU GGU CUggaau   g
      ||||| ||||| ||||||  ||||  || ||| |||||||    
      uccga gucgu gguugg  aggu  ca cca gaccuug   g
ggcaag     -     c      aa    ga  a   u       agg

Annotation confidence Not enough data

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Genome context

JH977669.1: 3481948-3482040 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-9292

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-9292

Accession	MIMAT0034952
Description	Eptesicus fuscus efu-miR-9292 mature miRNA
Sequence	11 - AGCACCAGCCUCCAAAGUAGGUUCU - 35
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545