miRBase entry: efu-mir-9297

Stem-loop efu-mir-9297

Accession

MI0028643

Description

Eptesicus fuscus efu-mir-9297 precursor miRNA

Sequence

cuccgcuuggUUUUACUUUCACUGGUUGGGGGGaacguggguccccaaagcccagagucagagcccuacgagaac
.((((...(((((((((((....((((..(((((.(....))))))..)))).))))).))))))...)).))..

Structure

-c  -  cuu      -     CACU    GG     a g 
  uc cg   ggUUUU ACUUU    GGUU  GGGGa c u
  || ||   |||||| |||||    ||||  ||||| |  
  ag gc   ccgaga ugaga    ccga  ccccu g g
ca  a  auc      c     ---c    aa     - g

Annotation confidence Not enough data

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Genome context

JH977683.1: 6835639-6835713 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-9297

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-9297

Accession	MIMAT0034958
Description	Eptesicus fuscus efu-miR-9297 mature miRNA
Sequence	11 - UUUUACUUUCACUGGUUGGGGGG - 33
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545