Stem-loop efu-mir-9298

Accession

MI0028646

Description

Eptesicus fuscus efu-mir-9298 precursor miRNA

Sequence

1739880 reads, 22136.0 reads per million, 8 experiments

ccagaaauCACAGAUGAUGAACUUACUGACGggcggacagagacucuguGCUGAUUGUCAUGUUCUGAUUUGGCucugagaguu
.((((...(.(((((.(.((((....((((((.((((((((...))))).))).)))))).))))).)))))).))))......

Structure

-----c    aau A     G U    UUAC      g   -     g 
      caga   C CAGAU A GAAC    UGACGg cgg acaga  
      ||||   | ||||| | ||||    |||||| ||| ||||| a
      gucu   G GUUUA U CUUG    ACUGUU GUC ugucu  
uugaga    --C -     G -    ---U      A   G     c 

Annotation confidence Medium

Genome context

JH977638.1: 2239290-2239373 [+]

Mature efu-miR-9298-5p

• Accession: MIMAT0058781
• Description: Eptesicus fuscus efu-miR-9298-5p mature miRNA
• Sequence: 9 - CACAGAUGAUGAACUUACUGACG - 31
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9298-3p

• Accession: MIMAT0034961
• Description: Eptesicus fuscus efu-miR-9298-3p mature miRNA
• Sequence: 50 - GCUGAUUGUCAUGUUCUGAUUUGGC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545