Stem-loop efu-mir-1307

Accession

MI0028652

Description

Eptesicus fuscus efu-mir-1307 precursor miRNA

Sequence

103058 reads, 1069.0 reads per million, 8 experiments

ccuaccaaucUCGACCGGACCUCGACCGGCUCGUcuauguugccaaucgACUCGGCGUGGCGUCGGUCGUGguagauaggug
.((((((....(((((((.((.((.((((.(((..............))).)))))).))..))))))))))))).......

Structure

------c      aucU       -A  U  A    C   Ucuaug 
       cuacca    CGACCGG  CC CG CCGG UCG      u
       ||||||    |||||||  || || |||| |||       
       gaugGU    GCUGGCU  GG GC GGCU Agc      u
guggaua      ----       GC  U  -    C   uaaccg 

Annotation confidence High

Genome context

JH977636.1: 6677293-6677374 [-]

Mature efu-miR-1307-5p

• Accession: MIMAT0034967
• Description: Eptesicus fuscus efu-miR-1307-5p mature miRNA
• Sequence: 11 - UCGACCGGACCUCGACCGGCUCGU - 34
• Evidence: experimental ; Illumina [1]

Mature efu-miR-1307-3p

• Accession: MIMAT0058784
• Description: Eptesicus fuscus efu-miR-1307-3p mature miRNA
• Sequence: 50 - ACUCGGCGUGGCGUCGGUCGUG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545