Stem-loop efu-mir-148

Accession

MI0028657

Description

Eptesicus fuscus efu-mir-148 precursor miRNA

Sequence

76679 reads, 1077.0 reads per million, 8 experiments

gcauuugagguGAAGUUCUGUUAUACACUUAGGCUguggcucucugaaagUCAGUGCAUCACAGAACUUUGUCucgaaagcuu
((.((((((((((((((((((.((.((((..((((.............)))))))).)).)))))))))))))))))).))..

Structure

--  a                  U  A    UA    guggc 
  gc uuugagguGAAGUUCUGU AU CACU  GGCU     u
  || |||||||||||||||||| || ||||  ||||     c
  cg aagcuCUGUUUCAAGACA UA GUGA  CUga     u
uu  a                  C  C    --    aaguc 

Annotation confidence High

Genome context

JH977623.1: 30756270-30756352 [+]

Mature efu-miR-148-5p

• Accession: MIMAT0058787
• Description: Eptesicus fuscus efu-miR-148-5p mature miRNA
• Sequence: 12 - GAAGUUCUGUUAUACACUUAGGCU - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-148-3p

• Accession: MIMAT0034972
• Description: Eptesicus fuscus efu-miR-148-3p mature miRNA
• Sequence: 51 - UCAGUGCAUCACAGAACUUUGUC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545