Stem-loop efu-mir-9309

Accession

MI0028667

Description

Eptesicus fuscus efu-mir-9309 precursor miRNA

Sequence

469 reads, 14.0 reads per million, 8 experiments

uuugcucuggcccgagUGAAGACUGAAGACUGAAGAcugaagaggCUUGGCUUCUCCGCUCCGGCCggagcagaga
((((((((((((.(((((..((..((((.((.(((.((....)).)))))))))))))))).))))))))))))..

Structure

--            c     AA  CU    A  G   A  g 
  uuugcucuggcc gagUG  GA  GAAG CU AAG cu a
  |||||||||||| |||||  ||  |||| || ||| ||  
  agacgaggCCGG CUCGC  CU  CUUC GG UUC ga a
ag            C     --  --    -  -   g  g 

Annotation confidence Medium

Genome context

JH977657.1: 3826653-3826728 [-]

Mature efu-miR-9309-5p

• Accession: MIMAT0058789
• Description: Eptesicus fuscus efu-miR-9309-5p mature miRNA
• Sequence: 17 - UGAAGACUGAAGACUGAAGA - 36
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9309-3p

• Accession: MIMAT0034982
• Description: Eptesicus fuscus efu-miR-9309-3p mature miRNA
• Sequence: 46 - CUUGGCUUCUCCGCUCCGGCC - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545