Stem-loop efu-mir-1271

Accession

MI0028675

Description

Eptesicus fuscus efu-mir-1271 precursor miRNA

Sequence

42846 reads, 403.0 reads per million, 8 experiments

cagaucagugCUUGGCACCUGGUAAGCACUCAguaaauaccuguugAGUGCCUGCUAUGUGCCAGGcauugugcugag
(((..(((((((((((((.(((((.((((((((((......)))))))))).))))).)))))))))))))..)))..

Structure

--   au             C     A          aa 
  cag  cagugCUUGGCAC UGGUA GCACUCAgua  u
  |||  ||||||||||||| ||||| ||||||||||   
  guc  guuacGGACCGUG AUCGU CGUGAguugu  a
ga   gu             U     C          cc 

Annotation confidence High

Genome context

JH977738.1: 66374-66451 [+]

Mature efu-miR-1271-5p

• Accession: MIMAT0034990
• Description: Eptesicus fuscus efu-miR-1271-5p mature miRNA
• Sequence: 11 - CUUGGCACCUGGUAAGCACUCA - 32
• Evidence: experimental ; Illumina [1]

Mature efu-miR-1271-3p

• Accession: MIMAT0058791
• Description: Eptesicus fuscus efu-miR-1271-3p mature miRNA
• Sequence: 47 - AGUGCCUGCUAUGUGCCAGG - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545