Stem-loop efu-mir-129a

Accession

MI0028686

Description

Eptesicus fuscus efu-mir-129a precursor miRNA

Sequence

1851 reads, 24.0 reads per million, 8 experiments

ccuucgcgaauCUUUUUGCGGUCUGGGCUUGCuguacauaacucaauagccggAAGCCCUUACCCCAAAAAGCAUucgcggaggg
((((((((((((((((((.(((..(((((((((((..........)))))...))))))..))).))))))).))))))))))).

Structure

-           -       C   CU      ---     acau 
 ccuucgcgaau CUUUUUG GGU  GGGCUU   GCugu    a
 ||||||||||| ||||||| |||  ||||||   |||||     
 ggaggcgcuUA GAAAAAC CCA  CCCGAA   cgaua    a
g           C       C   UU      ggc     acuc 

Annotation confidence High

Genome context

JH977650.1: 3739409-3739493 [-]

Mature efu-miR-129a-5p

• Accession: MIMAT0058799
• Description: Eptesicus fuscus efu-miR-129a-5p mature miRNA
• Sequence: 12 - CUUUUUGCGGUCUGGGCUUGC - 32
• Evidence: experimental ; Illumina [1]

Mature efu-miR-129a-3p

• Accession: MIMAT0035001
• Description: Eptesicus fuscus efu-miR-129a-3p mature miRNA
• Sequence: 54 - AAGCCCUUACCCCAAAAAGCAU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545