Stem-loop efu-mir-128b

Accession

MI0028690

Description

Eptesicus fuscus efu-mir-128b precursor miRNA

Sequence

66626 reads, 1099.0 reads per million, 8 experiments

agcuguuggauuCGGGGCCGUAGCACUGUCUGAGAgguuuacauuucUCACAGUGAACCGGUCUCUUUUUcagcugcuuc
(((.((((((...(((((((...((((((..(((((((....)))))))))))))...)))))))...)))))).)))..

Structure

--   u      uuC       UAG      CU       u 
  agc guugga   GGGGCCG   CACUGU  GAGAggu u
  ||| ||||||   |||||||   ||||||  |||||||  
  ucg cgacUU   CUCUGGC   GUGACA  CUcuuua a
cu   u      UUU       CAA      --       c 

Annotation confidence High

Genome context

JH977631.1: 10863595-10863674 [+]

Mature efu-miR-128b-5p

• Accession: MIMAT0058803
• Description: Eptesicus fuscus efu-miR-128b-5p mature miRNA
• Sequence: 13 - CGGGGCCGUAGCACUGUCUGAGA - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-128b-3p

• Accession: MIMAT0035005
• Description: Eptesicus fuscus efu-miR-128b-3p mature miRNA
• Sequence: 48 - UCACAGUGAACCGGUCUCUUUUU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545