Stem-loop efu-mir-26c

Accession

MI0028691

Description

Eptesicus fuscus efu-mir-26c precursor miRNA

Sequence

2555219 reads, 23310.0 reads per million, 8 experiments

uguggcuggaUUCAAGUAAUCCAGGAUAGGCUGUUuccaccugugaggCCUAUUCUUGAUUACUUGUUUcuggaggcagc
(((..(((((..(((((((((.((((((((((..............)))))))))).)))))))))..)))))..)))..

Structure

--   gg     UU         C          GUUucc 
  ugu  cugga  CAAGUAAUC AGGAUAGGCU      a
  |||  |||||  ||||||||| ||||||||||       
  acg  ggucU  GUUCAUUAG UCUUAUCCgg      c
cg   ga     UU         U          aguguc 

Annotation confidence High

Genome context

JH977659.1: 2129710-2129789 [-]

Mature efu-miR-26c-5p

• Accession: MIMAT0035006
• Description: Eptesicus fuscus efu-miR-26c-5p mature miRNA
• Sequence: 11 - UUCAAGUAAUCCAGGAUAGGCUGUU - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-26c-3p

• Accession: MIMAT0058804
• Description: Eptesicus fuscus efu-miR-26c-3p mature miRNA
• Sequence: 49 - CCUAUUCUUGAUUACUUGUUU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545