Stem-loop efu-mir-1388

Accession

MI0028700

Description

Eptesicus fuscus efu-mir-1388 precursor miRNA

Sequence

72316 reads, 738.0 reads per million, 8 experiments

cagugccuccAGGACUGACCAACCUGAGAAUGGugucuccaggucaAUCUCAGGUUCGUCAGCCUGUGaggugcuga
(((((((((((((.(((((.(((((((((.((((........)))).))))))))).))))))))).))))))))).

Structure

-         -    A     C         A    guc 
 cagugccuc cAGG CUGAC AACCUGAGA UGGu   u
 ||||||||| |||| ||||| ||||||||| ||||    
 gucguggaG GUCC GACUG UUGGACUCU acug   c
a         U    -     C         A    gac 

Annotation confidence High

Genome context

JH977768.1: 2595558-2595634 [-]

Mature efu-miR-1388-5p

• Accession: MIMAT0035015
• Description: Eptesicus fuscus efu-miR-1388-5p mature miRNA
• Sequence: 11 - AGGACUGACCAACCUGAGAAUGG - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-1388-3p

• Accession: MIMAT0058810
• Description: Eptesicus fuscus efu-miR-1388-3p mature miRNA
• Sequence: 47 - AUCUCAGGUUCGUCAGCCUGUG - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545