miRBase entry: efu-let-7d

Stem-loop efu-let-7d

Accession

MI0028701

Description

Eptesicus fuscus efu-let-7d precursor miRNA

Sequence

guuccuaggaAGAGGUAGUAGGUUGCAUAGUUUUagggcagggauuuugcccacaaggagguaacuauacgaccugcugccuuucuuagggccuua
..((((((((.((((((((((((((.((((((...((((((.....))))))..........)))))).)))))))))))))))))))))).....

Structure

---gu        A              C      -------UUa      g 
     uccuagga GAGGUAGUAGGUUG AUAGUU          gggcag g
     |||||||| |||||||||||||| ||||||          |||||| a
     gggauucu uuccgucguccagc uaucaa          cccguu u
auucc        -              a      uggaggaaca      u

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

JH977714.1: 1026627-1026722 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-let-7d

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-let-7d

Accession	MIMAT0035016
Description	Eptesicus fuscus efu-let-7d mature miRNA
Sequence	11 - AGAGGUAGUAGGUUGCAUAGUUUU - 34
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545