Stem-loop efu-mir-423

Accession

MI0028709

Description

Eptesicus fuscus efu-mir-423 precursor miRNA

Sequence

174565 reads, 2330.0 reads per million, 8 experiments

gaaguuaggcUGAGGGGCAGAGAGCGAGACUUUUcuauuuuccaaaAGCUCGGUCUGAGGCCCCUCAGUcuugcuuccu
(((((.((((((((((((..(((.((((.(((((.........))))))))).)))...)))))))))))).)))))..

Structure

--     u            -AG   G    A     cua 
  gaagu aggcUGAGGGGC   AGA CGAG CUUUU   u
  ||||| ||||||||||||   ||| |||| |||||   u
  cuucg ucUGACUCCCCG   UCU GCUC GAaaa   u
uc     u            GAG   G    -     ccu 

Annotation confidence High

Genome context

JH977654.1: 9486224-9486302 [+]

Mature efu-miR-423-5p

• Accession: MIMAT0035024
• Description: Eptesicus fuscus efu-miR-423-5p mature miRNA
• Sequence: 11 - UGAGGGGCAGAGAGCGAGACUUUU - 34
• Evidence: experimental ; Illumina [1]

Mature efu-miR-423-3p

• Accession: MIMAT0058817
• Description: Eptesicus fuscus efu-miR-423-3p mature miRNA
• Sequence: 47 - AGCUCGGUCUGAGGCCCCUCAGU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545