miRBase entry: efu-mir-299

Stem-loop efu-mir-299


Accession
MI0028712
Description
Eptesicus fuscus efu-mir-299 precursor miRNA


Sequence

390 reads, 13.0 reads per million, 8 experiments
cuugaagaaaUGGUUUACCGUCCCACAUACAuuuugaauaugUAUGUGGGACGGUAAACCGCUUcuugguauc
..(.(((((.((((((((((((((((((((((.......)))))))))))))))))))))).))))).)....

Structure
--cu g     a                      uu 
    u aagaa UGGUUUACCGUCCCACAUACAu  u
    | ||||| ||||||||||||||||||||||  g
    g uucUU GCCAAAUGGCAGGGUGUAUgua  a
cuau g     C                      ua 


Annotation confidence High
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Genome context
JH977717.1: 868334-868406 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from efu-mir-299
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-299-5p

Accession MIMAT0035027
Description Eptesicus fuscus efu-miR-299-5p mature miRNA
Sequence 11 - UGGUUUACCGUCCCACAUACA - 31
Evidence experimental
Illumina [1]

Mature efu-miR-299-3p

Accession MIMAT0058820
Description Eptesicus fuscus efu-miR-299-3p mature miRNA
Sequence 43 - UAUGUGGGACGGUAAACCGCUU - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545